Human Gene Set: GSE27786_LSK_VS_LIN_NEG_CELL_UP


Standard name GSE27786_LSK_VS_LIN_NEG_CELL_UP
Systematic name M4739
Brief description Genes up-regulated in comparison of LSK versus lineage negative cells.
Full description or abstract Each fraction of mouse hematopoietic cells was purified by cell sorting from bone marrow of 8-week-old C57BL/6 mice, and its gene expression was analyzed.
Collection C7: Immunologic Signature
      IMMUNESIGDB: ImmuneSigDB
Source publication Pubmed 21540074   Authors: Konuma T,Nakamura S,Miyagi S,Negishi M,Chiba T,Oguro H,Yuan J,Mochizuki-Kashio M,Ichikawa H,Miyoshi H,Vidal M,Iwama A
Exact source GSE27786_2082_200_UP
Related gene sets (show 89 additional gene sets from the source publication)

(show 40 gene sets from the same authors)
External links
Filtered by similarity ?
Source species Mus musculus
Contributed by Jernej Godec (Dana-Farber Cancer Institute)
Source platform or
identifier namespace		 HUMAN_GENE_SYMBOL
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 200 genes
Gene families ? Categorize these 200 genes by gene family
Show members (show 200 source identifiers mapped to 200 genes)
Version history 7.3: Moved to ImmuneSigDB sub-collection.

See MSigDB license terms here. Please note that certain gene sets have special access terms.