Human Gene Set: GSE12845_PRE_GC_VS_DARKZONE_GC_TONSIL_BCELL_UP


Standard name GSE12845_PRE_GC_VS_DARKZONE_GC_TONSIL_BCELL_UP
Systematic name M3203
Brief description Genes up-regulated in comparison of pre-germinal center B cells versus dark zone germinal center B cells.
Full description or abstract B cells from human tonsil and blood were sorted using flow cytometry. The human samples were processed immediately ex-vivo using markers for known B cell subsets.
Collection C7: Immunologic Signature
      IMMUNESIGDB: ImmuneSigDB
Source publication Pubmed 19023113   Authors: Longo NS,Lugar PL,Yavuz S,Zhang W,Krijger PH,Russ DE,Jima DD,Dave SS,Grammer AC,Lipsky PE
Exact source GSE12845_2028_200_UP
Related gene sets (show 31 additional gene sets from the source publication)

(show 57 gene sets from the same authors)
External links
Filtered by similarity ?
Source species Homo sapiens
Contributed by Jernej Godec (Dana-Farber Cancer Institute)
Source platform or
identifier namespace		 HUMAN_GENE_SYMBOL
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 196 genes
Gene families ? Categorize these 196 genes by gene family
Show members (show 200 source identifiers mapped to 196 genes)
Version history 7.3: Moved to ImmuneSigDB sub-collection.

See MSigDB license terms here. Please note that certain gene sets have special access terms.