Human Gene Set: GAUTAM_EYE_IRIS_CILIARY_BODY_ACTIVATED_T_CELLS


Standard name GAUTAM_EYE_IRIS_CILIARY_BODY_ACTIVATED_T_CELLS
Systematic name M43603
Brief description Occular cell types curated from Gautam and Hamashima et al. Multi-species single-cell transcriptomic analysis of ocular compartment regulons
Full description or abstract  
Collection C8: Cell Type Signature
Source publication Pubmed 34584087   Authors: Gautam P,Hamashima K,Chen Y,Zeng Y,Makovoz B,Parikh BH,Lee HY,Lau KA,Su X,Wong RCB,Chan WK,Li H,Blenkinsop TA,Loh YH
Exact source Supplementary Data 2: One-sided Wilcoxon rank-sum test p-values for the markers of cell types in iris/ciliary body. pAdj<0.05,Log2FC>1.5.
Related gene sets (show 28 additional gene sets from the source publication)

(show 2458 gene sets from the same authors)
External links http://www.ncbi.nlm.nih.gov/pmc/articles/pmc8478974/
Filtered by similarity ?
Source species Homo sapiens
Contributed by Anthony Castanza (MSigDB Team)
Source platform or
identifier namespace		 HUMAN_GENE_SYMBOL
Dataset references (show 2 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 128 genes
Gene families ? Categorize these 128 genes by gene family
Show members (show 135 source identifiers mapped to 128 genes)
Version history 7.5: First Introduced.

See MSigDB license terms here. Please note that certain gene sets have special access terms.