Standard name |
FUNG_IL2_TARGETS_WITH_STAT5_BINDING_SITES_T1 |
Systematic name |
M5058 |
Brief description |
Genes with putative STAT5 [GeneID=6777] binding sites; up-regulated by IL2 [GeneID=3558] only in T1 cells (primary thymocytes immortalized by Tax, an HTLV-1 encoded gene). |
Full description or abstract |
Interleukin-2 (IL-2) mediates cell cycle progression and antiapoptosis in human T cells via several signal transduction pathways. The Tax protein of the human T-cell leukemia virus type I (HTLV-1) deregulates cell growth and alters the role of IL-2 in infected cells. However, Tax-immortalized cells stay dependent on IL-2, suggesting that events besides HTLV-1 gene expression are required for leukemia to develop. Here, IL-2-dependent and -independent events were analysed in a human T cell line immortalized by Tax. These studies show that, of the signaling pathways evaluated, only STAT5 remains dependent. Microarray analyses revealed several genes, including il-5, il-9 and il-13, are uniquely upregulated by IL-2 in the presence of Tax. Bioinformatics and supporting molecular biology show that some of these genes are STAT5 targets, explaining their IL-2 upregulation. These results suggest that IL-2 and viral proteins work together to induce gene expression, promoting the hypothesis that deregulation via the constitutive activation of STAT5 may lead to the IL-2-independent phenotype of HTLV-1-transformed cells. |
Collection |
C2: Curated CGP: Chemical and Genetic Perturbations |
Source publication |
Pubmed 15735688 Authors: Fung MM,Chu YL,Fink JL,Wallace A,McGuire KL |
Exact source |
Table 3: Genes uniquely upregulated by IL-2 in T1 |
Related gene sets |
(show 3 additional gene sets from the source publication)
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External links |
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Source species |
Homo sapiens |
Contributed by |
Arthur Liberzon (MSigDB Team) |
Source platform or identifier namespace |
Human_RefSeq |
Dataset references |
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GTEx compendium
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Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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these 9 genes
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9 genes by gene family
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(show 9 source identifiers mapped to 9 genes)
Source Id |
NCBI (Entrez) Gene Id |
Gene Symbol |
Gene Description |
NM_000590 |
3578 |
IL9 |
interleukin 9 [Source:HGNC Symbol;Acc:H... |
NM_000879 |
3567 |
IL5 |
interleukin 5 [Source:HGNC Symbol;Acc:H... |
NM_002188 |
3596 |
IL13 |
interleukin 13 [Source:HGNC Symbol;Acc:... |
NM_002460 |
3662 |
IRF4 |
interferon regulatory factor 4 [Source:... |
NM_002467 |
4609 |
MYC |
MYC proto-oncogene, bHLH transcription ... |
NM_002546 |
4982 |
TNFRSF11B |
TNF receptor superfamily member 11b [So... |
NM_002983 |
6348 |
CCL3 |
C-C motif chemokine ligand 3 [Source:HG... |
NM_004367 |
1235 |
CCR6 |
C-C motif chemokine receptor 6 [Source:... |
NM_024508 |
79413 |
ZBED2 |
zinc finger BED-type containing 2 [Sour... |
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