Human Gene Set: CSR_EARLY_UP.V1_DN


Standard name CSR_EARLY_UP.V1_DN
Systematic name M2655
Brief description Genes down-regulated in early serum response of CRL 2091 cells (foreskin fibroblasts).
Full description or abstract Foreskin fibroblasts CRL 2091 (ATCC) were serum starved for 48 hours, and harvested at the indicated time points after switching to media with 10% FBS essentially as described (Iyer et al., 1999). RNA from all of the sampled time points were pooled as reference RNA to compare with RNA from individual time points as described (Iyer et al., 1999)
Collection C6: Oncogenic Signature
Source publication Pubmed 14737219   Authors: Chang HY,Sneddon JB,Alizadeh AA,Sood R,West RB,Montgomery K,Chi JT,van de Rijn M,Botstein D,Brown PO
Exact source CSR_early (1 to 6 h) vs Control (0 h); bottom 200 genes (diff. of means)
Related gene sets (show 6 additional gene sets from the source publication)

(show 18 gene sets from the same authors)
External links
Filtered by similarity ?
Source species Homo sapiens
Contributed by Pablo Tamayo (Broad Institute)
Source platform or
identifier namespace		 HUMAN_GENE_SYMBOL
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 126 genes
Gene families ? Categorize these 126 genes by gene family
Show members (show 200 source identifiers mapped to 126 genes)
Version history  

See MSigDB license terms here. Please note that certain gene sets have special access terms.