Human Gene Set: CLASPER_LYMPHATIC_VESSELS_DURING_METASTASIS_DN

For the Mouse gene set with the same name, see CLASPER_LYMPHATIC_VESSELS_DURING_METASTASIS_DN

Standard name CLASPER_LYMPHATIC_VESSELS_DURING_METASTASIS_DN
Systematic name M11788
Brief description Selected genes down-regulated during invasion of lymphatic vessels during metastasis.
Full description or abstract Invasion of lymphatic vessels is a key step in the metastasis of primary tumors to draining lymph nodes. Although the process is enhanced by tumor lymphangiogenesis, it is unclear whether this is a consequence of increased lymphatic vessel number, altered lymphatic vessel properties, or both. Here we have addressed the question by comparing the RNA profiles of primary lymphatic endothelial cells (LEC) isolated from the vasculature of normal tissue and from highly metastatic T-241/vascular endothelial growth factor (VEGF)-C fibrosarcomas implanted in C57BL/6 mice. Our findings reveal significant differences in expression of some 792 genes (i.e., >or=2-fold up- or down-regulated, P
Collection C2: Curated
      CGP: Chemical and Genetic Perturbations
Source publication Pubmed 18794116   Authors: Clasper S,Royston D,Baban D,Cao Y,Ewers S,Butz S,Vestweber D,Jackson DG
Exact source Table 1: fold change < 0
Related gene sets (show 1 additional gene sets from the source publication)

(show 11 gene sets from the same authors)
External links
Filtered by similarity ?
Source species Mus musculus
Contributed by Jessica Robertson (MSigDB Team)
Source platform or
identifier namespace
AFFY_Mouse430
Dataset references (show 1 datasets)
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 35 genes
Gene families ? Categorize these 35 genes by gene family
Show members (show 36 source identifiers mapped to 35 genes)
Version history 3.0: First introduced

See MSigDB license terms here. Please note that certain gene sets have special access terms.