login
register
GSEA Home
Downloads
Molecular Signatures Database
Documentation
Contact
Team
MSigDB Home
Human Collections
About
Browse
Search
Investigate
Gene Families
Mouse Collections
About
Browse
Search
Investigate
Help
Human Gene Set: BIOCARTA_BOTULIN_PATHWAY
Standard name
BIOCARTA_BOTULIN_PATHWAY
Systematic name
M22086
Brief description
Blockade of Neurotransmitter Relase by Botulinum Toxin
Full description or abstract
Collection
C2: Curated
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
Source publication
Exact source
Related gene sets
External links
https://data.broadinstitute.org/gsea-msigdb/msigdb/biocarta/human/h_botulinPathway.gif
Filtered by similarity
?
Source species
Homo sapiens
Contributed by
BioCarta
Source platform or
identifier namespace
Human_RefSeq
Dataset references
Download gene set
format:
grp
|
gmt
|
xml
|
json
|
TSV metadata
Compute overlaps
?
(
show
collections to investigate for overlap with this gene set)
H: Hallmark
C1: Positional
C2: Curated
CGP: Chemical and Genetic Perturbations
CP: Canonical Pathways
CP:BIOCARTA: BioCarta Pathways
CP:KEGG_MEDICUS: KEGG Medicus Pathways
CP:PID: PID Pathways
CP:REACTOME: Reactome Pathways
CP:WIKIPATHWAYS: WikiPathways
CP:KEGG_LEGACY: KEGG Legacy Pathways
C3: Regulatory Target
MIR: microRNA Targets
MIR:MIRDB: miRDB
MIR:MIR_LEGACY: MIR_Legacy
TFT: Transcription Factor Targets
TFT:GTRD: GTRD
TFT:TFT_LEGACY: TFT_Legacy
C4: Computational
3CA: Curated Cancer Cell Atlas gene sets
CGN: Cancer Gene Neighborhoods
CM: Cancer Modules
C5: Ontology
GO: Gene Ontology
GO:BP: GO Biological Process
GO:CC: GO Cellular Component
GO:MF: GO Molecular Function
HPO: Human Phenotype Ontology
C6: Oncogenic Signature
C7: Immunologic Signature
IMMUNESIGDB: ImmuneSigDB
VAX: HIPC Vaccine Response
C8: Cell Type Signature
Compendia expression profiles
?
NG-CHM interactive heatmaps
(
Please note that clustering takes a few seconds
)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query
Further investigate
these 5 genes
Gene families
?
Categorize
these 5 genes by gene family
Show members
(
show
8 source identifiers mapped to 5 genes)
Source
Id
NCBI (Entrez)
Gene Id
Gene
Symbol
Gene
Description
NM_000079
1134
CHRNA1
cholinergic receptor nicotinic alpha 1 s...
NM_000738
1128
CHRM1
cholinergic receptor muscarinic 1 [Sourc...
NM_001039523
1134
CHRNA1
cholinergic receptor nicotinic alpha 1 s...
NM_001165903
6804
STX1A
syntaxin 1A [Source:HGNC Symbol;Acc:HGNC...
NM_003081
6616
SNAP25
synaptosome associated protein 25 [Sourc...
NM_004603
6804
STX1A
syntaxin 1A [Source:HGNC Symbol;Acc:HGNC...
NM_014232
6844
VAMP2
vesicle associated membrane protein 2 [S...
NM_130811
6616
SNAP25
synaptosome associated protein 25 [Sourc...
Version history
7.0: First introduced. Upgraded to final version of Biocarta.
See
MSigDB license terms here
. Please note that certain gene sets have special access terms.