Human Gene Set: BANG_VERTEPORFIN_ENDOMETRIAL_CANCER_CELLS_UP

For the Mouse gene set with the same name, see BANG_VERTEPORFIN_ENDOMETRIAL_CANCER_CELLS_UP

Standard name BANG_VERTEPORFIN_ENDOMETRIAL_CANCER_CELLS_UP
Systematic name M45002
Brief description Tha authors analyzed RNA sequencing data to investigate the comprehensive transcriptomic landscape of Verteporfin treated Type 1 endometrial cancer cell lines, including HEC-1-A and HEC-1-B.
Full description or abstract Verteporfin is a porphyrinic photosensitizer clinically used for the photodynamic treatment of age-related macular degeneration. The authors previously tested the efficacy of Verteporfin in endometrial cancer cells and observed cytotoxic and anti-proliferative effects.
Collection C2: Curated
      CGP: Chemical and Genetic Perturbations
Source publication Pubmed 30846786   Authors: Bang LG,Dasari VR,Kim D,Gogoi RP
Exact source Table 1. Top 20 upregulated genes in HEC-1-A and HEC-1-B cells after VP treatment, ranked by logFC.
Related gene sets (show 1 additional gene sets from the source publication)
External links https://www.ncbi.nlm.nih.gov/pmc/articles/PMC6405995/
Filtered by similarity ?
Source species Homo sapiens
Contributed by Mouse Genome Informatics (MGI) (The Jackson Laboratory (JAX))
Source platform or
identifier namespace		 HUMAN_GENE_SYMBOL
Dataset references  
Download gene set format: grp | gmt | xml | json | TSV metadata
Compute overlaps ? (show collections to investigate for overlap with this gene set)
Compendia expression profiles ? NG-CHM interactive heatmaps
(Please note that clustering takes a few seconds)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)

Legacy heatmaps (PNG)
GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
Advanced query Further investigate these 20 genes
Gene families ? Categorize these 20 genes by gene family
Show members (show 20 source identifiers mapped to 20 genes)
Version history 2022.1.Hs: First Introduced.

See MSigDB license terms here. Please note that certain gene sets have special access terms.