Standard name |
FRASOR_TAMOXIFEN_RESPONSE_DN |
Systematic name |
M5082 |
Brief description |
Genes preferentially down-regulated in MCF-7 cells (breast cancer) by tamoxifen [PubChem=5376] but not by estradiol or fulvestrant (ICI 182780) [PubChem=5757;3478439]. |
Full description or abstract |
The beneficial effect of the selective estrogen receptor (ER) modulator tamoxifen in the treatment and prevention of breast cancer is assumed to be through its ability to antagonize the stimulatory actions of estrogen, although tamoxifen can also have some estrogen-like agonist effects. Here, we report that, in addition to these mixed agonist/antagonist actions, tamoxifen can also selectively regulate a unique set of >60 genes, which are minimally regulated by estradiol (E2) or raloxifene in ERalpha-positive MCF-7 human breast cancer cells. This gene regulation by tamoxifen is mediated by ERalpha and reversed by E2 or ICI 182,780. Introduction of ERbeta into MCF-7 cells reverses tamoxifen action on approximately 75% of these genes. To examine whether these genes might serve as markers of tamoxifen sensitivity and/or the development of resistance, their expression level was examined in breast cancers of women who had received adjuvant therapy with tamoxifen. High expression of two of the tamoxifen-stimulated genes, YWHAZ/14-3-3z and LOC441453, was found to correlate significantly with disease recurrence following tamoxifen treatment in women with ER-positive cancers and hence seem to be markers of a poor prognosis. Our data indicate a new dimension in tamoxifen action, involving gene expression regulation that is tamoxifen preferential, and identify genes that might serve as markers of tumor responsiveness or resistance to tamoxifen therapy. This may have a potential effect on the choice of tamoxifen versus aromatase inhibitors as adjuvant endocrine therapy. |
Collection |
C2: Curated CGP: Chemical and Genetic Perturbations |
Source publication |
Pubmed 16849584 Authors: Frasor J,Chang EC,Komm B,Lin CY,Vega VB,Liu ET,Miller LD,Smeds J,Bergh J,Katzenellenbogen BS |
Exact source |
Table 1BS |
Related gene sets |
(show 1 additional gene sets from the source publication)
(show 30 gene sets from the same authors)
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Source species |
Homo sapiens |
Contributed by |
Arthur Liberzon (MSigDB Team) |
Source platform or identifier namespace |
AFFY_HG_U133 |
Dataset references |
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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GTEx compendium
Human tissue compendium (Novartis)
Global Cancer Map (Broad Institute)
NCI-60 cell lines (National Cancer Institute)
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these 12 genes
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12 genes by gene family
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(show 12 source identifiers mapped to 12 genes)
Source Id |
NCBI (Entrez) Gene Id |
Gene Symbol |
Gene Description |
202936_s_at |
6662 |
SOX9 |
SRY-box transcription factor 9 [Source:... |
203769_s_at |
412 |
STS |
steroid sulfatase [Source:HGNC Symbol;A... |
204382_at |
26151 |
NAT9 |
N-acetyltransferase 9 (putative) [Sourc... |
209460_at |
18 |
ABAT |
4-aminobutyrate aminotransferase [Sourc... |
209536_s_at |
30844 |
EHD4 |
EH domain containing 4 [Source:HGNC Sym... |
212593_s_at |
27250 |
PDCD4 |
programmed cell death 4 [Source:HGNC Sy... |
212830_at |
1955 |
MEGF9 |
multiple EGF like domains 9 [Source:HGN... |
213129_s_at |
2653 |
GCSH |
glycine cleavage system protein H [Sour... |
216438_s_at |
7114 |
TMSB4X |
thymosin beta 4 X-linked [Source:HGNC S... |
218976_at |
56521 |
DNAJC12 |
DnaJ heat shock protein family (Hsp40) ... |
219956_at |
11226 |
GALNT6 |
polypeptide N-acetylgalactosaminyltrans... |
220319_s_at |
29116 |
MYLIP |
myosin regulatory light chain interacti... |
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Version history |
3.0: First introduced
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